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WormBase Tree Display for CDS: OVOC280

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Name Class

OVOC280EvidenceCurator_confirmedWBPerson2062
SMapS_parentSequenceOVOC_OM1b_7
StructureSource_exons1135
330384
805909
12781361
16691703
18501935
26122757
29513145
34763597
DB_infoDB_remarkcontains similarity to Pfam domain PF08543 (Phosphomethylpyrimidine kinase); contains similarity to Interpro domains IPR004625 (Pyridoxine kinase), IPR013749 (Pyridoxamine kinase/Phosphomethylpyrimidine kinase), IPR029056 (Ribokinase-like)
OriginFrom_laboratoryMGM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00237089
Corresponding_transcriptOVOC280.1
Corresponding_proteinOVP07707
Matching_cDNAAI130304Inferred_automaticallytranscript_builder.pl
AW203892Inferred_automaticallytranscript_builder.pl
BF482130Inferred_automaticallytranscript_builder.pl
ovolvulus_GG626|c157_g1_i8Inferred_automaticallytranscript_builder.pl
Brief_identificationPutative pyridoxal kinasePerson_evidenceWBPerson2973
RNASeq_FPKMWBls:0000104 (15)
WBls:000010718.1789From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010810.3137From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
35.1954From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
37.6677From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:000066418.185From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
27.4402From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Methodcurated