WormBase Tree Display for CDS: OVOC280
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OVOC280 | Evidence | Curator_confirmed | WBPerson2062 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | OVOC_OM1b_7 | |||
Structure | Source_exons | 1 | 135 | |||
330 | 384 | |||||
805 | 909 | |||||
1278 | 1361 | |||||
1669 | 1703 | |||||
1850 | 1935 | |||||
2612 | 2757 | |||||
2951 | 3145 | |||||
3476 | 3597 | |||||
DB_info | DB_remark | contains similarity to Pfam domain PF08543 (Phosphomethylpyrimidine kinase); contains similarity to Interpro domains IPR004625 (Pyridoxine kinase), IPR013749 (Pyridoxamine kinase/Phosphomethylpyrimidine kinase), IPR029056 (Ribokinase-like) | ||||
Origin | From_laboratory | MGM | ||||
Species | Onchocerca volvulus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00237089 | ||||
Corresponding_transcript | OVOC280.1 | |||||
Corresponding_protein | OVP07707 | |||||
Matching_cDNA | AI130304 | Inferred_automatically | transcript_builder.pl | |||
AW203892 | Inferred_automatically | transcript_builder.pl | ||||
BF482130 | Inferred_automatically | transcript_builder.pl | ||||
ovolvulus_GG626|c157_g1_i8 | Inferred_automatically | transcript_builder.pl | ||||
Brief_identification | Putative pyridoxal kinase | Person_evidence | WBPerson2973 | |||
RNASeq_FPKM | WBls:0000104 (15) | |||||
WBls:0000107 | 18.1789 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
WBls:0000108 | 10.3137 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | |||
35.1954 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | ||||
37.6677 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
WBls:0000664 | 18.185 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | |||
27.4402 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | ||||
Method | curated |