WormBase Tree Display for CDS: OVOC285
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| OVOC285 | Evidence | Curator_confirmed | WBPerson2062 | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | OVOC_OM1b_7 | |||
| Structure | Source_exons | 1 | 221 | |||
| 492 | 633 | |||||
| 1043 | 1279 | |||||
| 1471 | 1668 | |||||
| DB_info | DB_remark | contains similarity to Pfam domain PF03029 (Conserved hypothetical ATP binding protein); contains similarity to Interpro domains IPR004130 (GPN-loop GTPase), IPR030231 (GPN-loop GTPase 2), IPR027417 (P-loop containing nucleoside triphosphate hydrolase) | ||||
| Origin | From_laboratory | MGM | ||||
| Species | Onchocerca volvulus | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00237094 | ||||
| Corresponding_transcript | OVOC285.1 | |||||
| OVOC285.2 | ||||||
| Corresponding_protein | OVP03169 | |||||
| Matching_cDNA | ovolvulus_GG626|c182_g1_i1 | Inferred_automatically | transcript_builder.pl | |||
| ovolvulus_GG626|c182_g1_i3 | Inferred_automatically | transcript_builder.pl | ||||
| ovolvulus_GG626|c182_g1_i4 | Inferred_automatically | transcript_builder.pl | ||||
| ovolvulus_GG626|c182_g1_i9 | Inferred_automatically | transcript_builder.pl | ||||
| ovolvulus_GG626|c182_g1_i10 | Inferred_automatically | transcript_builder.pl | ||||
| ovolvulus_GG626|c182_g1_i11 | Inferred_automatically | transcript_builder.pl | ||||
| ovolvulus_GG626|c182_g1_i12 | Inferred_automatically | transcript_builder.pl | ||||
| ovolvulus_GG626|c182_g1_i16 | Inferred_automatically | transcript_builder.pl | ||||
| Brief_identification | GPN-loop GTPase 2 homolog | Person_evidence | WBPerson2973 | |||
| RNASeq_FPKM | WBls:0000104 (15) | |||||
| WBls:0000107 | 13.9329 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
| WBls:0000108 | 29.3987 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | |||
| 6.18507 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
| 9.83773 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | ||||
| WBls:0000664 | 7.04381 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | |||
| 8.1061 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | ||||
| Method | curated |
