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WormBase Tree Display for CDS: OVOC288

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Name Class

OVOC288SMapS_parentSequenceOVOC_OM1b_7
StructureSource_exons (12)
DB_infoDB_remarkOVO-CDT-1 protein; contains similarity to Pfam domains PF08839 (DNA replication factor CDT1 like), PF16679 (DNA replication factor Cdt1 C-terminal domain); contains similarity to Interpro domains IPR032054 (DNA replication factor Cdt1, C-terminal), IPR014939 (CDT1 Geminin-binding domain-like), IPR036390 (Winged helix DNA-binding domain superfamily)
OriginFrom_laboratoryMGM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00237097
Corresponding_transcriptOVOC288.1
Corresponding_proteinOVP02941
RNASeq_FPKMWBls:0000104 (14)
WBls:00001071.54971From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001080.641936From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
2.88987From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
3.10776From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
WBls:00006644.74396From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
5.19967From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
Methodcurated