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WormBase Tree Display for CDS: OVOC321

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Name Class

OVOC321EvidenceCurator_confirmedWBPerson2062
SMapS_parentSequenceOVOC_OM1b_7
StructureSource_exons164
10351142
26162744
34193507
37413815
39394076
42864396
45424632
47814867
51515224
DB_infoDB_remarkcontains similarity to Pfam domain PF00071 (Ras family); contains similarity to Interpro domains IPR001806 (Small GTPase), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR005225 (Small GTP-binding protein domain), IPR042227 (NF-kappa-B inhibitor-interacting Ras-like protein)
OriginFrom_laboratoryMBM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00237130
Corresponding_transcriptOVOC321.1
Corresponding_proteinOVP13679
Matching_cDNAovolvulus_GG626|c199_g1_i3Inferred_automaticallytranscript_builder.pl
Brief_identificationNF-kappa-B inhibitor-interacting Ras-like protein homologPerson_evidenceWBPerson2973
RNASeq_FPKMWBls:0000104 (15)
WBls:000010749.2045From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010845.374From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
65.061From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
70.8068From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:000066410.8979From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
23.1962From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
Remark[140414 es9] Merged OVOC320 and OVOC321 based on RNA-Seq and protein evidence data.Curator_confirmedWBPerson2062
Methodcurated