WormBase Tree Display for CDS: OVOC321
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OVOC321 | Evidence | Curator_confirmed | WBPerson2062 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | OVOC_OM1b_7 | |||
Structure | Source_exons | 1 | 64 | |||
1035 | 1142 | |||||
2616 | 2744 | |||||
3419 | 3507 | |||||
3741 | 3815 | |||||
3939 | 4076 | |||||
4286 | 4396 | |||||
4542 | 4632 | |||||
4781 | 4867 | |||||
5151 | 5224 | |||||
DB_info | DB_remark | contains similarity to Pfam domain PF00071 (Ras family); contains similarity to Interpro domains IPR001806 (Small GTPase), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR005225 (Small GTP-binding protein domain), IPR042227 (NF-kappa-B inhibitor-interacting Ras-like protein) | ||||
Origin | From_laboratory | MBM | ||||
Species | Onchocerca volvulus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00237130 | ||||
Corresponding_transcript | OVOC321.1 | |||||
Corresponding_protein | OVP13679 | |||||
Matching_cDNA | ovolvulus_GG626|c199_g1_i3 | Inferred_automatically | transcript_builder.pl | |||
Brief_identification | NF-kappa-B inhibitor-interacting Ras-like protein homolog | Person_evidence | WBPerson2973 | |||
RNASeq_FPKM | WBls:0000104 (15) | |||||
WBls:0000107 | 49.2045 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
WBls:0000108 | 45.374 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | |||
65.061 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | ||||
70.8068 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | ||||
WBls:0000664 | 10.8979 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | |||
23.1962 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | ||||
Remark | [140414 es9] Merged OVOC320 and OVOC321 based on RNA-Seq and protein evidence data. | Curator_confirmed | WBPerson2062 | |||
Method | curated |