WormBase Tree Display for CDS: OVOC341
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OVOC341 | Evidence | Curator_confirmed | WBPerson2062 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | OVOC_OM1b_7 | |||
Structure | Source_exons | 1 | 17 | |||
456 | 558 | |||||
718 | 1132 | |||||
1394 | 1602 | |||||
DB_info | DB_remark | OVO-RPL-7 protein; contains similarity to Pfam domains PF00327 (Ribosomal protein L30p/L7e), PF08079 (Ribosomal L30 N-terminal domain); contains similarity to Interpro domains IPR036919 (Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily), IPR012988 (Large ribosomal subunit protein uL30, N-terminal, eukaryotes), IPR039699 (Large ribosomal subunit protein uL30), IPR005998 (Large ribosomal subunit protein uL30, eukaryotic), IPR023106 (), IPR016082 (Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain) | ||||
Origin | From_laboratory | MGM | ||||
Species | Onchocerca volvulus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00237150 | ||||
Corresponding_transcript | OVOC341.1 | |||||
OVOC341.2 | ||||||
Corresponding_protein | OVP06666 | |||||
Matching_cDNA (21) | ||||||
Brief_identification | 60S ribosomal protein L7 homolog | Person_evidence | WBPerson2973 | |||
RNASeq_FPKM | WBls:0000104 (15) | |||||
WBls:0000107 | 56.2961 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
WBls:0000108 | 115.758 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | |||
120.52 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
31.0756 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | ||||
WBls:0000664 | 268.639 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | |||
474.453 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | ||||
Method | curated |