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WormBase Tree Display for CDS: OVOC341

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Name Class

OVOC341EvidenceCurator_confirmedWBPerson2062
SMapS_parentSequenceOVOC_OM1b_7
StructureSource_exons117
456558
7181132
13941602
DB_infoDB_remarkOVO-RPL-7 protein; contains similarity to Pfam domains PF00327 (Ribosomal protein L30p/L7e), PF08079 (Ribosomal L30 N-terminal domain); contains similarity to Interpro domains IPR036919 (Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily), IPR012988 (Large ribosomal subunit protein uL30, N-terminal, eukaryotes), IPR039699 (Large ribosomal subunit protein uL30), IPR005998 (Large ribosomal subunit protein uL30, eukaryotic), IPR023106 (), IPR016082 (Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain)
OriginFrom_laboratoryMGM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00237150
Corresponding_transcriptOVOC341.1
OVOC341.2
Corresponding_proteinOVP06666
Matching_cDNA (21)
Brief_identification60S ribosomal protein L7 homologPerson_evidenceWBPerson2973
RNASeq_FPKMWBls:0000104 (15)
WBls:000010756.2961From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:0000108115.758From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
120.52From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
31.0756From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:0000664268.639From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
474.453From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Methodcurated