WormBase Tree Display for CDS: OVOC3490

OVOC3490 Evidence: Curator_confirmed: WBPerson2062
  SMap: S_parent: Sequence: OVOC_OM1b_199
  Structure: Source_exons: 1 64
      436 619
      768 800
      969 1201
      1378 1534
      2027 2058
      2481 2576
      2799 2985
      3259 3334
      3421 3544
      3740 3938
      4367 4464
      4567 4668
      4883 4965
  DB_info: DB_remark: contains similarity to Pfam domain PF01607 (Chitin binding Peritrophin-A domain); contains similarity to Interpro domains IPR036508 (Chitin binding domain superfamily), IPR002557 (Chitin binding domain)
  Origin: From_laboratory: MBM
    Species: Onchocerca volvulus
  Properties: Coding: CDS
      Prediction_status: Partially_confirmed
  Visible: Gene: WBGene00240299
    Corresponding_transcript: OVOC3490.1
    Corresponding_protein: OVP13130
    Matching_cDNA: ovolvulus_GG570|c188_g1_i6 Inferred_automatically: transcript_builder.pl
    RNASeq_FPKM: WBls:0000104 0.134336 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
        0.141985 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
        0.159675 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
        0.553297 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
        0 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
        10.2167 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
        10.2919 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
        11.0555 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
        12.2962 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
        14.3199 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
        15.4235 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
        16.7233 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
        3.76319 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
        5.58003 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
        7.72968 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
      WBls:0000107 0.062238 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
      WBls:0000108 0.047973 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
        0.080794 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
        0.146543 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
      WBls:0000664 0 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
    Remark: [140324 es9] Merged OVOC3490, OVOC3491 and OVOC3492 based on RNA-Seq, SL1 and protein evidence data. Curator_confirmed: WBPerson2062
  Method: curated