WormBase Tree Display for CDS: OVOC380
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OVOC380 | Evidence | Curator_confirmed | WBPerson2062 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | OVOC_OM1b_7 | |||
Structure | Source_exons | 1 | 33 | |||
447 | 607 | |||||
959 | 1113 | |||||
1279 | 1472 | |||||
1723 | 1917 | |||||
2525 | 2659 | |||||
DB_info | DB_remark | OVO-CYC-1 protein; contains similarity to Pfam domain PF02167 (Cytochrome C1 family); contains similarity to Interpro domains IPR036909 (Cytochrome c-like domain superfamily), IPR002326 (Cytochrome c1), IPR021157 (Cytochrome c1, transmembrane anchor, C-terminal) | ||||
Origin | From_laboratory | MBM | ||||
Species | Onchocerca volvulus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00237189 | ||||
Corresponding_transcript | OVOC380.1 | |||||
Corresponding_protein | OVP13156 | |||||
Brief_identification | Cytochrome c1, heme protein, mitochondrial homolog | Person_evidence | WBPerson2973 | |||
RNASeq_FPKM | WBls:0000104 (15) | |||||
WBls:0000107 | 102.985 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
WBls:0000108 | 137.227 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | |||
80.3296 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | ||||
90.3567 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
WBls:0000664 | 130.612 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | |||
69.2453 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | ||||
Remark | [140310 es9] Splice sites of OVOC380 gene model corrected using RNA-Seq, protein evidence and SL1 data. | Curator_confirmed | WBPerson2062 | |||
Method | curated |