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WormBase Tree Display for CDS: OVOC380

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Name Class

OVOC380EvidenceCurator_confirmedWBPerson2062
SMapS_parentSequenceOVOC_OM1b_7
StructureSource_exons133
447607
9591113
12791472
17231917
25252659
DB_infoDB_remarkOVO-CYC-1 protein; contains similarity to Pfam domain PF02167 (Cytochrome C1 family); contains similarity to Interpro domains IPR036909 (Cytochrome c-like domain superfamily), IPR002326 (Cytochrome c1), IPR021157 (Cytochrome c1, transmembrane anchor, C-terminal)
OriginFrom_laboratoryMBM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00237189
Corresponding_transcriptOVOC380.1
Corresponding_proteinOVP13156
Brief_identificationCytochrome c1, heme protein, mitochondrial homologPerson_evidenceWBPerson2973
RNASeq_FPKMWBls:0000104 (15)
WBls:0000107102.985From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:0000108137.227From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
80.3296From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
90.3567From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:0000664130.612From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
69.2453From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Remark[140310 es9] Splice sites of OVOC380 gene model corrected using RNA-Seq, protein evidence and SL1 data.Curator_confirmedWBPerson2062
Methodcurated