WormBase Tree Display for CDS: OVOC385
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| OVOC385 | Evidence | Curator_confirmed | WBPerson2062 | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | OVOC_OM1b_7 | |||
| Structure | Source_exons (21) | |||||
| DB_info | DB_remark | contains similarity to Pfam domains PF00211 (Adenylate and Guanylate cyclase catalytic domain), PF01094 (Receptor family ligand binding region), PF07714 (Protein tyrosine and serine/threonine kinase); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR001170 (Adenylyl cyclase class-4/guanylyl cyclase), IPR001245 (Serine-threonine/tyrosine-protein kinase, catalytic domain), IPR029787 (Nucleotide cyclase), IPR001828 (Receptor, ligand binding region), IPR028082 (Periplasmic binding protein-like I), IPR001054 (Adenylyl cyclase class-3/4/guanylyl cyclase) | ||||
| Origin | From_laboratory | MBM | ||||
| Species | Onchocerca volvulus | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00237194 | ||||
| Corresponding_transcript | OVOC385.1 | |||||
| Corresponding_protein | OVP13425 | |||||
| Matching_cDNA | ovolvulus_GG638|c56_g1_i6 | Inferred_automatically | transcript_builder.pl | |||
| Brief_identification | Atrial natriuretic peptide receptor 3 homolog | Person_evidence | WBPerson2973 | |||
| RNASeq_FPKM | WBls:0000104 (15) | |||||
| WBls:0000107 | 16.9569 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
| WBls:0000108 | 15.6548 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | |||
| 38.2123 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
| 65.1602 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | ||||
| WBls:0000664 | 10.903 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | |||
| 7.4611 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | ||||
| Remark | [140214 es9] Merged OVOC383, OVOC384 and OVOC385 based on RNA-Seq and Compara data. | Curator_confirmed | WBPerson2062 | |||
| Method | curated |
