WormBase Tree Display for CDS: OVOC396
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| OVOC396 | Evidence | Curator_confirmed | WBPerson2062 | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | OVOC_OM1b_7 | |||
| Structure | Source_exons | 1 | 94 | |||
| 357 | 435 | |||||
| 578 | 704 | |||||
| DB_info | DB_remark | OVO-RPB-10 protein; contains similarity to Pfam domain PF01194 (RNA polymerases N / 8 kDa subunit); contains similarity to Interpro domains IPR000268 (DNA-directed RNA polymerase subunit RPABC5/Rpb10), IPR023580 (RNA polymerase subunit RPB10) | ||||
| Origin | From_laboratory | MBM | ||||
| Species | Onchocerca volvulus | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Partially_confirmed | |||||
| Visible | Gene | WBGene00237205 | ||||
| Corresponding_transcript | OVOC396.1 | |||||
| Corresponding_protein | OVP13365 | |||||
| RNASeq_FPKM | WBls:0000104 (12) | |||||
| WBls:0000107 | 54.9594 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
| WBls:0000108 | 2292.92 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | |||
| 2826.57 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | ||||
| 882.531 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | ||||
| WBls:0000664 | 197.832 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | |||
| 205.11 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | ||||
| Remark | [140306 es9] Splice sites of OVOC396 gene model corrected using RNA-Seq, protein evidence, SL1 and mRNA data. | Curator_confirmed | WBPerson2062 | |||
| Method | curated |
