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WormBase Tree Display for CDS: OVOC422

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Name Class

OVOC422EvidenceCurator_confirmedWBPerson2062
SMapS_parentSequenceOVOC_OM1b_7
StructureSource_exons1135
269392
4971044
11541330
DB_infoDB_remarkcontains similarity to Pfam domain PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domain IPR002486 (Nematode cuticle collagen, N-terminal)
OriginFrom_laboratoryMGM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00237231
Corresponding_transcriptOVOC422.1
OVOC422.2
Corresponding_proteinOVP09483
Matching_cDNAAW562074Inferred_automaticallytranscript_builder.pl
ovolvulus_GG638|c60_g3_i1Inferred_automaticallytranscript_builder.pl
ovolvulus_GG638|c60_g3_i5Inferred_automaticallytranscript_builder.pl
ovolvulus_GG638|c60_g5_i1Inferred_automaticallytranscript_builder.pl
ovolvulus_GG638|c60_g5_i4Inferred_automaticallytranscript_builder.pl
RNASeq_FPKMWBls:0000104 (15)
WBls:00001070.634032From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001080.231093From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
0.747157From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
0.834543From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
WBls:00006640.597534From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
1.26184From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Methodcurated