WormBase Tree Display for CDS: OVOC424
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OVOC424 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | OVOC_OM1b_7 | |||
Structure | Source_exons | 1 | 155 | |||
535 | 637 | |||||
819 | 1126 | |||||
1309 | 1495 | |||||
1693 | 1845 | |||||
1964 | 2147 | |||||
2282 | 2441 | |||||
2773 | 2973 | |||||
3136 | 3288 | |||||
3456 | 3591 | |||||
DB_info | DB_remark | OVO-PRY-1 protein; contains similarity to Pfam domains PF00615 (Regulator of G protein signaling domain), PF00778 (DIX domain); contains similarity to Interpro domains IPR038207 (DIX domain superfamily), IPR036305 (RGS domain superfamily), IPR029071 (Ubiquitin-like domain superfamily), IPR001158 (DIX domain), IPR016137 (RGS domain) | ||||
Origin | From_laboratory | MGM | ||||
Species | Onchocerca volvulus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00237233 | ||||
Corresponding_transcript | OVOC424.1 | |||||
Corresponding_protein | OVP06940 | |||||
Matching_cDNA | ovolvulus_GG638|c42_g1_i1 | Inferred_automatically | transcript_builder.pl | |||
ovolvulus_GG638|c42_g1_i5 | Inferred_automatically | transcript_builder.pl | ||||
RNASeq_FPKM | WBls:0000104 (15) | |||||
WBls:0000107 | 10.5378 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
WBls:0000108 | 17.5631 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | |||
17.7732 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | ||||
9.83246 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | ||||
WBls:0000664 | 13.9852 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | |||
14.3087 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | ||||
Method | curated |