WormBase Tree Display for CDS: OVOC440
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OVOC440 | Evidence | Curator_confirmed | WBPerson2062 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | OVOC_OM1b_7 | |||
Structure | Source_exons | 1 | 113 | |||
226 | 334 | |||||
DB_info | DB_remark | OVO-UBL-5 protein; contains similarity to Pfam domain PF00240 (Ubiquitin family); contains similarity to Interpro domains IPR029071 (Ubiquitin-like domain superfamily), IPR039732 (Ubiquitin-like modifier Hub1/Ubl5), IPR000626 (Ubiquitin-like domain) | ||||
Origin | From_laboratory | MGM | ||||
Species | Onchocerca volvulus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00237249 | ||||
Corresponding_transcript | OVOC440.1 | |||||
Corresponding_protein | OVP06083 | |||||
Matching_cDNA | AA618909 | Inferred_automatically | transcript_builder.pl | |||
AI539939 | Inferred_automatically | transcript_builder.pl | ||||
ovolvulus_GG625|c24_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
Brief_identification | Ubiquitin-like protein 5 homolog | Person_evidence | WBPerson2973 | |||
RNASeq_FPKM | WBls:0000104 (15) | |||||
WBls:0000107 | 37.3969 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
WBls:0000108 | 16.2833 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | |||
20.4495 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | ||||
8.68189 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
WBls:0000664 | 47.3669 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | |||
70.9176 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | ||||
Method | curated |