WormBase Tree Display for CDS: OVOC442
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| OVOC442 | Evidence | Curator_confirmed | WBPerson2062 | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | OVOC_OM1b_7 | |||
| Structure | Source_exons (19) | |||||
| DB_info | DB_remark | contains similarity to Pfam domain PF07842 (GC-rich sequence DNA-binding factor-like protein); contains similarity to Interpro domains IPR012890 (Intron Large complex component GCFC2-like), IPR022783 (GCF, C-terminal) | ||||
| Origin | From_laboratory | MBM | ||||
| Species | Onchocerca volvulus | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00237251 | ||||
| Corresponding_transcript | OVOC442.1 | |||||
| Corresponding_protein | OVP14219 | |||||
| Matching_cDNA | ovolvulus_GG625|c61_g1_i1 | Inferred_automatically | transcript_builder.pl | |||
| RNASeq_FPKM | WBls:0000104 (15) | |||||
| WBls:0000107 | 8.82743 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
| WBls:0000108 | 29.4224 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | |||
| 29.5884 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | ||||
| 4.76797 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | ||||
| WBls:0000664 | 40.6356 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | |||
| 45.6849 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | ||||
| Remark | [140403 es9] Gene model OVOC442 has been split into this and OVOC13414 based on RNA-Seq and protein evidence data. | Curator_confirmed | WBPerson2062 | |||
| Method | curated |
