WormBase Tree Display for CDS: OVOC4479
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OVOC4479 | SMap | S_parent | Sequence | OVOC_OM2_21 | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 28 | |||
474 | 542 | |||||
751 | 878 | |||||
1105 | 1281 | |||||
1517 | 1777 | |||||
2006 | 2263 | |||||
2567 | 2713 | |||||
2910 | 3008 | |||||
DB_info | DB_remark | OVO-FBP-1 protein; contains similarity to Pfam domain PF00316 (Fructose-1-6-bisphosphatase, N-terminal domain); contains similarity to Interpro domains IPR033391 (Fructose-1-6-bisphosphatase class I, N-terminal), IPR028343 (Fructose-1,6-bisphosphatase), IPR000146 (Fructose-1,6-bisphosphatase class 1) | ||||
Origin | From_laboratory | MGM | ||||
Species | Onchocerca volvulus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00241288 | ||||
Corresponding_transcript | OVOC4479.1 | |||||
Corresponding_protein | OVP02018 | |||||
Matching_cDNA | AA294029 | Inferred_automatically | transcript_builder.pl | |||
ovolvulus_GG1348|c18_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
Brief_identification | Fructose-1,6-bisphosphatase homolog | Person_evidence | WBPerson2973 | |||
RNASeq_FPKM | WBls:0000104 (15) | |||||
WBls:0000107 | 162.04 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
WBls:0000108 | 113.663 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | |||
139.736 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
73.9691 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | ||||
WBls:0000664 | 165.817 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | |||
74.8333 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | ||||
Method | curated |