Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: OVOC456

expand all nodes | collapse all nodes | view schema

Name Class

OVOC456SMapS_parentSequenceOVOC_OM1b_7
StructureSource_exons (24)
DB_infoDB_remarkOVO-NATH-10 protein; contains similarity to Pfam domains PF05127 (Helicase), PF08351 (tRNA(Met) cytidine acetyltransferase TmcA, N-terminal), PF13718 (GNAT acetyltransferase 2), PF13725 (Possible tRNA binding domain); contains similarity to Interpro domains IPR013562 (tRNA(Met) cytidine acetyltransferase TmcA, N-terminal), IPR007807 (Helicase domain), IPR027992 (Possible tRNA binding domain), IPR000182 (GNAT domain), IPR016181 (Acyl-CoA N-acyltransferase), IPR032672 (TmcA/NAT10/Kre33)
OriginFrom_laboratoryMGM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00237265
Corresponding_transcriptOVOC456.1
Corresponding_proteinOVP10312
Matching_cDNAovolvulus_GG625|c59_g1_i3Inferred_automaticallytranscript_builder.pl
Brief_identificationUPF0202 protein homologPerson_evidenceWBPerson2973
RNASeq_FPKMWBls:0000104 (15)
WBls:00001076.40242From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010818.9647From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
26.3554From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
4.96762From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:000066433.5406From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
50.1358From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Methodcurated