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WormBase Tree Display for CDS: OVOC479

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Name Class

OVOC479EvidenceCurator_confirmedWBPerson2062
SMapS_parentSequenceOVOC_OM1b_7
StructureSource_exons145
483774
10171087
12601371
15011739
DB_infoDB_remarkcontains similarity to Pfam domain PF00059 (Lectin C-type domain); contains similarity to Interpro domains IPR016186 (C-type lectin-like/link domain superfamily), IPR001304 (C-type lectin-like), IPR016187 (C-type lectin fold)
OriginFrom_laboratoryMBM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00237288
Corresponding_transcriptOVOC479.1
Corresponding_proteinOVP14180
Matching_cDNAovolvulus_GG642|c0_g1_i1Inferred_automaticallytranscript_builder.pl
RNASeq_FPKMWBls:0000104 (15)
WBls:00001078.03736From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010810.3521From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
12.8244From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
4.86234From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
WBls:00006640From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Remark[140506 es9] Splice sites of OVOC479 gene model corrected using RNA-Seq and protein evidence data.Curator_confirmedWBPerson2062
Methodcurated