WormBase Tree Display for CDS: OVOC488
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OVOC488 | Evidence | Curator_confirmed | WBPerson2062 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | OVOC_OM1b_7 | |||
Structure | Source_exons | 1 | 116 | |||
462 | 575 | |||||
920 | 1025 | |||||
1220 | 1322 | |||||
9982 | 10042 | |||||
10435 | 10524 | |||||
10615 | 10687 | |||||
10848 | 10965 | |||||
11200 | 11288 | |||||
DB_info | DB_remark | OVO-DHHC-7 protein; contains similarity to Pfam domain PF01529 (DHHC palmitoyltransferase); contains similarity to Interpro domain IPR001594 (Palmitoyltransferase, DHHC domain) | ||||
Origin | From_laboratory | MBM | ||||
Species | Onchocerca volvulus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00237297 | ||||
Corresponding_transcript | OVOC488.1 | |||||
Corresponding_protein | OVP13194 | |||||
Brief_identification | Palmitoyltransferase homolog | Person_evidence | WBPerson2973 | |||
RNASeq_FPKM | WBls:0000104 (15) | |||||
WBls:0000107 | 42.0681 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
WBls:0000108 | 49.9964 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | |||
57.2518 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
75.9711 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | ||||
WBls:0000664 | 34.3561 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | |||
43.7061 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | ||||
Remark | [140310 es9] Merged OVOC485 and OVOC488 based on RNA-Seq, SL1 and protein evidence data. | Curator_confirmed | WBPerson2062 | |||
Method | curated |