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WormBase Tree Display for CDS: OVOC542

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Name Class

OVOC542EvidenceCurator_confirmedWBPerson2062
SMapS_parentSequenceOVOC_OM1b_7
StructureSource_exons (22)
DB_infoDB_remarkOVO-NOAH-1 protein; contains similarity to Pfam domain PF00024 (PAN domain); contains similarity to Interpro domains IPR003609 (PAN/Apple domain), IPR001507 (Zona pellucida domain)
OriginFrom_laboratoryMBM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00237351
Corresponding_transcriptOVOC542.1
Corresponding_proteinOVP14379
Matching_cDNAovolvulus_GG629|c205_g1_i4Inferred_automaticallytranscript_builder.pl
ovolvulus_GG629|c205_g2_i2Inferred_automaticallytranscript_builder.pl
ovolvulus_GG629|c205_g3_i1Inferred_automaticallytranscript_builder.pl
RNASeq_FPKMWBls:0000104 (15)
WBls:00001073.13372From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001080.541301From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
27.3342From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
777.099From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
WBls:00006640.377205From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
0.557022From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Remark[140507 es9] Splice sites of OVOC542 gene model corrected using RNA-Seq, protein evidence and SL1 data.Curator_confirmedWBPerson2062
Methodcurated