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WormBase Tree Display for CDS: OVOC551

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Name Class

OVOC551EvidenceCurator_confirmedWBPerson2062
SMapS_parentSequenceOVOC_OM1b_7
StructureSource_exons1162
401769
9431131
12041383
14701596
17691959
21482399
DB_infoDB_remarkOVO-MEI-1 protein; contains similarity to Pfam domains PF00004 (ATPase family associated with various cellular activities (AAA)), PF09336 (Vps4 C terminal oligomerisation domain), PF17862 (AAA+ lid domain); contains similarity to Interpro domains IPR003959 (ATPase, AAA-type, core), IPR015415 (Spastin/Vps4, C-terminal), IPR041569 (AAA ATPase, AAA+ lid domain), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR003593 (AAA+ ATPase domain)
OriginFrom_laboratoryMBM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00237360
Corresponding_transcriptOVOC551.1
Corresponding_proteinOVP13007
RNASeq_FPKMWBls:0000104 (15)
WBls:000010732.8928From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010822.6495From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
30.2383From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
34.5275From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:000066435.0105From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
36.3798From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Remark[140306 es9] Gene model OVOC551 has been split into this, OVOC13394 and OVOC13395 based on SL1, RNA-Seq and protein evidence data.Curator_confirmedWBPerson2062
Methodcurated