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WormBase Tree Display for CDS: OVOC555

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Name Class

OVOC555EvidenceCurator_confirmedWBPerson2062
SMapS_parentSequenceOVOC_OM1b_7
StructureSource_exons142
813957
10371211
15131672
DB_infoDB_remarkcontains similarity to Pfam domain PF04032 (RNAse P Rpr2/Rpp21/SNM1 subunit domain); contains similarity to Interpro domain IPR007175 (Ribonuclease P subunit, Rpr2/Snm1/Rpp21)
OriginFrom_laboratoryMBM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00237364
Corresponding_transcriptOVOC555.1
Corresponding_proteinOVP13151
Matching_cDNABF918276Inferred_automaticallytranscript_builder.pl
RNASeq_FPKMWBls:0000104 (15)
WBls:000010715.7284From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010815.9235From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
16.6657From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
21.7042From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
WBls:000066419.1622From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
29.7105From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Remark[140306 es9] Splice sites of OVOC555 gene model corrected using RNA-Seq, protein evidence, SL1 and mRNA data.Curator_confirmedWBPerson2062
Methodcurated