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WormBase Tree Display for CDS: OVOC557

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Name Class

OVOC557EvidenceCurator_confirmedWBPerson2062
SMapS_parentSequenceOVOC_OM1b_7
StructureSource_exons1111
376520
600685
800856
11691297
14471538
16061768
21812324
24262578
DB_infoDB_remarkOVO-RPN-8 protein; contains similarity to Pfam domains PF01398 (JAB1/Mov34/MPN/PAD-1 ubiquitin protease), PF13012 (Maintenance of mitochondrial structure and function); contains similarity to Interpro domains IPR000555 (JAB1/MPN/MOV34 metalloenzyme domain), IPR024969 (EIF3F/CSN6-like, C-terminal)
OriginFrom_laboratoryMGM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00237366
Corresponding_transcriptOVOC557.1
Corresponding_proteinOVP06565
Matching_cDNA (11)
RNASeq_FPKMWBls:0000104 (15)
WBls:0000107105.648From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:0000108167.465From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
188.802From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
84.293From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:0000664190.769From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
238.689From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
Methodcurated