WormBase Tree Display for CDS: OVOC562
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| OVOC562 | SMap | S_parent | Sequence | OVOC_OM1b_7 | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (12) | |||||
| DB_info | DB_remark | OVO-SRC-1 protein; contains similarity to Pfam domains PF00017 (SH2 domain), PF00018 (SH3 domain), PF07714 (Protein tyrosine and serine/threonine kinase); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR036860 (SH2 domain superfamily), IPR036028 (SH3-like domain superfamily), IPR001245 (Serine-threonine/tyrosine-protein kinase, catalytic domain), IPR001452 (SH3 domain), IPR000980 (SH2 domain), IPR020635 (Tyrosine-protein kinase, catalytic domain) | ||||
| Origin | From_laboratory | MGM | ||||
| Species | Onchocerca volvulus | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00237371 | ||||
| Corresponding_transcript | OVOC562.1 | |||||
| Corresponding_protein | OVP07279 | |||||
| RNASeq_FPKM | WBls:0000104 (15) | |||||
| WBls:0000107 | 7.24396 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
| WBls:0000108 | 10.4141 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | |||
| 26.2226 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | ||||
| 27.0432 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
| WBls:0000664 | 18.203 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | |||
| 23.3218 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | ||||
| Method | curated |
