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WormBase Tree Display for CDS: OVOC564

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Name Class

OVOC564SMapS_parentSequenceOVOC_OM1b_7
StructureSource_exons197
495627
845943
10101139
15081744
18712050
21442233
24002513
DB_infoDB_remarkOVO-IDHA-1 protein; contains similarity to Pfam domain PF00180 (Isocitrate/isopropylmalate dehydrogenase); contains similarity to Interpro domains IPR004434 (Isocitrate dehydrogenase NAD-dependent), IPR024084 (Isopropylmalate dehydrogenase-like domain)
OriginFrom_laboratoryMGM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00237373
Corresponding_transcriptOVOC564.1
Corresponding_proteinOVP05986
Matching_cDNAovolvulus_GG629|c169_g3_i3Inferred_automaticallytranscript_builder.pl
Brief_identificationPutative isocitrate dehydrogenase [NAD] subunit alpha, mitochondrialPerson_evidenceWBPerson2973
RNASeq_FPKMWBls:0000104 (15)
WBls:000010725.6049From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010814.8763From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
19.1527From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
25.2476From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:000066418.5989From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
32.2203From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
Methodcurated