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WormBase Tree Display for CDS: OVOC566

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Name Class

OVOC566SMapS_parentSequenceOVOC_OM1b_7
StructureSource_exons (15)
DB_infoDB_remarkOVO-VACL-14 protein; contains similarity to Pfam domains PF11916 (Vacuolar protein 14 C-terminal Fig4p binding), PF12755 (Vacuolar 14 Fab1-binding region); contains similarity to Interpro domains IPR032878 (), IPR026825 (Vacuole morphology and inheritance protein 14), IPR021841 (Vacuolar protein 14, C-terminal Fig4-binding domain), IPR011989 (Armadillo-like helical), IPR016024 (Armadillo-type fold)
OriginFrom_laboratoryMGM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00237375
Corresponding_transcriptOVOC566.1
Corresponding_proteinOVP05156
RNASeq_FPKMWBls:0000104 (12)
WBls:00001074.69096From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010811.5705From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
14.8808From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
4.30961From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:000066410.3636From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Methodcurated