WormBase Tree Display for CDS: OVOC566
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OVOC566 | SMap | S_parent | Sequence | OVOC_OM1b_7 | ||
---|---|---|---|---|---|---|
Structure | Source_exons (15) | |||||
DB_info | DB_remark | OVO-VACL-14 protein; contains similarity to Pfam domains PF11916 (Vacuolar protein 14 C-terminal Fig4p binding), PF12755 (Vacuolar 14 Fab1-binding region); contains similarity to Interpro domains IPR032878 (), IPR026825 (Vacuole morphology and inheritance protein 14), IPR021841 (Vacuolar protein 14, C-terminal Fig4-binding domain), IPR011989 (Armadillo-like helical), IPR016024 (Armadillo-type fold) | ||||
Origin | From_laboratory | MGM | ||||
Species | Onchocerca volvulus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00237375 | ||||
Corresponding_transcript | OVOC566.1 | |||||
Corresponding_protein | OVP05156 | |||||
RNASeq_FPKM | WBls:0000104 (12) | |||||
WBls:0000107 | 4.69096 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
WBls:0000108 | 11.5705 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | |||
14.8808 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
4.30961 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | ||||
WBls:0000664 | 10.3636 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | |||
Method | curated |