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WormBase Tree Display for CDS: OVOC5748

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Name Class

OVOC5748EvidenceCurator_confirmedWBPerson2062
SMapS_parentSequenceOVOC_OM2_79
StructureSource_exons130
302418
574685
10281102
54755560
57115819
60216094
62286365
64646574
67056806
DB_infoDB_remarkcontains similarity to Pfam domains PF00804 (Syntaxin), PF05739 (SNARE domain); contains similarity to Interpro domains IPR000727 (Target SNARE coiled-coil homology domain), IPR010989 (SNARE), IPR006011 (Syntaxin, N-terminal domain)
OriginFrom_laboratoryMBM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00242557
Corresponding_transcriptOVOC5748.1
Corresponding_proteinOVP14563
RNASeq_FPKMWBls:0000104 (15)
WBls:000010736.6029From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010811.7754From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
25.8442From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
30.0888From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:000066433.0419From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
38.5343From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Remark[140508 es9] Merged OVOC5748 and OVOC5750 based on RNA-Seq and protein evidence data.Curator_confirmedWBPerson2062
Methodcurated