WormBase Tree Display for CDS: OVOC582
expand all nodes | collapse all nodes | view schema
OVOC582 | Evidence | Curator_confirmed | WBPerson2062 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | OVOC_OM1b_7 | |||
Structure | Source_exons | 1 | 38 | |||
273 | 387 | |||||
909 | 1082 | |||||
DB_info | DB_remark | OVO-DDP-1 protein; contains similarity to Pfam domain PF02953 (Tim10/DDP family zinc finger); contains similarity to Interpro domains IPR004217 (Tim10-like), IPR035427 (Tim10-like domain superfamily), IPR039238 () | ||||
Origin | From_laboratory | MGM | ||||
Species | Onchocerca volvulus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Partially_confirmed | |||||
Start_not_found | 1 | |||||
Visible | Gene | WBGene00237391 | ||||
Corresponding_transcript | OVOC582.1 | |||||
Corresponding_protein | OVP10088 | |||||
Matching_cDNA | AW351413 | Inferred_automatically | transcript_builder.pl | |||
BF599141 | Inferred_automatically | transcript_builder.pl | ||||
BF599205 | Inferred_automatically | transcript_builder.pl | ||||
BF942755 | Inferred_automatically | transcript_builder.pl | ||||
BG310500 | Inferred_automatically | transcript_builder.pl | ||||
Brief_identification | Mitochondrial import inner membrane translocase subunit tim-8 homolog | Person_evidence | WBPerson2973 | |||
RNASeq_FPKM | WBls:0000104 (15) | |||||
WBls:0000107 | 81.2929 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
WBls:0000108 | 120.538 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | |||
120.852 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | ||||
99.142 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
WBls:0000664 | 117.03 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | |||
87.5667 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | ||||
Method | curated |