Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: OVOC598

expand all nodes | collapse all nodes | view schema

Name Class

OVOC598EvidenceCurator_confirmedWBPerson2062
SMapS_parentSequenceOVOC_OM1b_7
StructureSource_exons1171
9901047
12321319
14821600
23712553
27332821
30743205
35563684
40554174
DB_infoDB_remarkOVO-PGHM-1 protein; contains similarity to Pfam domains PF01082 (Copper type II ascorbate-dependent monooxygenase, N-terminal domain), PF03712 (Copper type II ascorbate-dependent monooxygenase, C-terminal domain); contains similarity to Interpro domains IPR008977 (PHM/PNGase F domain superfamily), IPR000323 (Copper type II, ascorbate-dependent monooxygenase, N-terminal), IPR024548 (Copper type II ascorbate-dependent monooxygenase, C-terminal), IPR014784 (Copper type II, ascorbate-dependent monooxygenase-like, C-terminal), IPR000720 (Peptidylglycine alpha-hydroxylating monooxygenase/peptidyl-hydroxyglycine alpha-amidating lyase), IPR036939 (Copper type II, ascorbate-dependent monooxygenase, N-terminal domain superfamily)
OriginFrom_laboratoryMGM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusPartially_confirmed
Start_not_found1
VisibleGeneWBGene00237407
Corresponding_transcriptOVOC598.1
Corresponding_proteinOVP06629
Matching_cDNAAA624961Inferred_automaticallytranscript_builder.pl
AA629449Inferred_automaticallytranscript_builder.pl
AI124424Inferred_automaticallytranscript_builder.pl
AI132829Inferred_automaticallytranscript_builder.pl
AW313107Inferred_automaticallytranscript_builder.pl
Brief_identificationPutative peptidylglycine alpha-hydroxylating monooxygenasePerson_evidenceWBPerson2973
RNASeq_FPKMWBls:0000104 (15)
WBls:0000107235.239From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:0000108138.017From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
222.045From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
286.408From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:0000664446.11From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
512.164From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
Methodcurated