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WormBase Tree Display for CDS: OVOC599

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Name Class

OVOC599EvidenceCurator_confirmedWBPerson2062
SMapS_parentSequenceOVOC_OM1b_7
StructureSource_exons189
658755
9581031
12631517
16071723
19312050
23802490
29583026
DB_infoDB_remarkcontains similarity to Pfam domain PF16019 (Cysteine/serine-rich nuclear protein N-terminus); contains similarity to Interpro domains IPR031972 (Cysteine/serine-rich nuclear protein, N-terminal domain), IPR023260 (Cysteine/serine-rich nuclear protein family)
OriginFrom_laboratoryMBM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00237408
Corresponding_transcriptOVOC599.1
OVOC599.2
Corresponding_proteinOVP13370
Matching_cDNAovolvulus_GG629|c190_g2_i3Inferred_automaticallytranscript_builder.pl
ovolvulus_GG629|c190_g2_i6Inferred_automaticallytranscript_builder.pl
RNASeq_FPKMWBls:0000104 (15)
WBls:000010727.6291From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010822.9598From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
33.5275From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
41.1584From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:000066433.1712From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
45.1403From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
Remark[140310 es9] Splice sites of OVOC599 gene model corrected using RNA-Seq, protein evidence and SL1 data.Curator_confirmedWBPerson2062
Methodcurated