WormBase Tree Display for CDS: OVOC614
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OVOC614 | Evidence | Curator_confirmed | WBPerson2062 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | OVOC_OM1b_7 | |||
Structure | Source_exons | 1 | 156 | |||
4254 | 4403 | |||||
6639 | 6740 | |||||
6934 | 7176 | |||||
7303 | 7477 | |||||
7691 | 7763 | |||||
8031 | 8165 | |||||
8462 | 8849 | |||||
DB_info | DB_remark | contains similarity to Pfam domain PF10177 (Uncharacterised conserved protein (DUF2371)); contains similarity to Interpro domain IPR018787 (Protein of unknown function DUF2371, TMEM200) | ||||
Origin | From_laboratory | MBM | ||||
Species | Onchocerca volvulus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00237423 | ||||
Corresponding_transcript | OVOC614.1 | |||||
Corresponding_protein | OVP13318 | |||||
Matching_cDNA | AA934332 | Inferred_automatically | transcript_builder.pl | |||
RNASeq_FPKM | WBls:0000104 (15) | |||||
WBls:0000107 | 12.2739 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
WBls:0000108 | 11.1164 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | |||
12.5702 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | ||||
19.4203 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
WBls:0000664 | 30.7356 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | |||
52.6691 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | ||||
Remark | [140307 es9] Merged OVOC614 and OVOC615 based on RNA-Seq, SL1 and protein evidence data. | Curator_confirmed | WBPerson2062 | |||
Method | curated |