WormBase Tree Display for CDS: OVOC635

OVOC635 SMap: S_parent: Sequence: OVOC_OM1b_7
  Structure: Source_exons: 1 132
      292 506
      1357 1484
      2325 2498
      4261 4385
      4654 4818
      5160 5241
      6982 7079
      7240 7431
  DB_info: DB_remark: contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor), PF00105 (Zinc finger, C4 type (two domains)); contains similarity to Interpro domains IPR001723 (Nuclear hormone receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding domain), IPR035500 (Nuclear hormone receptor-like domain superfamily)
  Origin: From_laboratory: MGM
    Species: Onchocerca volvulus
  Properties: Coding: CDS
      Prediction_status: Confirmed
  Visible: Gene: WBGene00237444
    Corresponding_transcript: OVOC635.1
    Corresponding_protein: OVP10029
    Brief_identification: Steroid receptor seven-up homolog Person_evidence: WBPerson2973
    RNASeq_FPKM: WBls:0000104 (14)
      WBls:0000107 4.21598 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
      WBls:0000108 22.2405 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
        4.45208 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
        8.40516 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
      WBls:0000664 0.312398 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
        0.53511 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
  Method: curated