WormBase Tree Display for CDS: OVOC641
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| OVOC641 | SMap | S_parent | Sequence | OVOC_OM1b_7 | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 141 | |||
| 222 | 415 | |||||
| 748 | 913 | |||||
| 1244 | 1487 | |||||
| 1677 | 1817 | |||||
| 1886 | 2067 | |||||
| 2192 | 2272 | |||||
| DB_info | DB_remark | OVO-COQ-1 protein; contains similarity to Pfam domain PF00348 (Polyprenyl synthetase); contains similarity to Interpro domains IPR000092 (Polyprenyl synthetase), IPR008949 (Isoprenoid synthase domain superfamily) | ||||
| Origin | From_laboratory | MGM | ||||
| Species | Onchocerca volvulus | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00237450 | ||||
| Corresponding_transcript | OVOC641.1 | |||||
| Corresponding_protein | OVP09943 | |||||
| Matching_cDNA | ovolvulus_GG619|c23_g1_i1 | Inferred_automatically | transcript_builder.pl | |||
| Brief_identification | Decaprenyl-diphosphate synthase subunit 1 homolog | Person_evidence | WBPerson2973 | |||
| RNASeq_FPKM | WBls:0000104 (15) | |||||
| WBls:0000107 | 10.3032 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
| WBls:0000108 | 12.1984 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | |||
| 12.7597 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
| 9.61309 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | ||||
| WBls:0000664 | 10.6961 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | |||
| 17.0879 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | ||||
| Method | curated |
