WormBase Tree Display for CDS: OVOC654
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| OVOC654 | Evidence | Curator_confirmed | WBPerson2062 | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | OVOC_OM1b_7 | |||
| Structure | Source_exons (11) | |||||
| DB_info | DB_remark | OVO-ERM-1 protein; contains similarity to Pfam domains PF00373 (FERM central domain), PF00769 (Ezrin/radixin/moesin family C terminal), PF09379 (FERM N-terminal domain), PF09380 (FERM C-terminal PH-like domain); contains similarity to Interpro domains IPR000798 (Ezrin/radixin/moesin-like), IPR029071 (Ubiquitin-like domain superfamily), IPR014352 (FERM/acyl-CoA-binding protein superfamily), IPR018979 (FERM, N-terminal), IPR019748 (FERM central domain), IPR008954 (Moesin tail domain superfamily), IPR011993 (PH-like domain superfamily), IPR035963 (FERM superfamily, second domain), IPR018980 (FERM, C-terminal PH-like domain), IPR019749 (Band 4.1 domain), IPR011174 (Ezrin/radixin/moesin), IPR011259 (Ezrin/radixin/moesin, C-terminal) | ||||
| Origin | From_laboratory | MBM | ||||
| Species | Onchocerca volvulus | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00237463 | ||||
| Corresponding_transcript | OVOC654.1 | |||||
| Corresponding_protein | OVP13569 | |||||
| Matching_cDNA | ovolvulus_GG619|c38_g2_i1 | Inferred_automatically | transcript_builder.pl | |||
| Brief_identification | Moesin/ezrin/radixin homolog | Person_evidence | WBPerson2973 | |||
| RNASeq_FPKM | WBls:0000104 (15) | |||||
| WBls:0000107 | 44.4456 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
| WBls:0000108 | 32.8117 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | |||
| 37.3837 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | ||||
| 63.063 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
| WBls:0000664 | 26.6286 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | |||
| 32.7344 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | ||||
| Remark | [140507 es9] Splice sites of OVOC654 gene model corrected using RNA-Seq, protein evidence and SL1 data. | Curator_confirmed | WBPerson2062 | |||
| Method | curated |
