WormBase Tree Display for CDS: OVOC655
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| OVOC655 | Evidence | Curator_confirmed | WBPerson2062 | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | OVOC_OM1b_7 | |||
| Structure | Source_exons | 1 | 190 | |||
| 398 | 599 | |||||
| 1029 | 1132 | |||||
| 1391 | 1458 | |||||
| 1790 | 1888 | |||||
| 2014 | 2193 | |||||
| 2366 | 2575 | |||||
| DB_info | DB_remark | OVO-MRPS-15 protein; contains similarity to Pfam domain PF00312 (Ribosomal protein S15); contains similarity to Interpro domains IPR000589 (Small ribosomal subunit protein uS15), IPR009068 (uS15/NS1, RNA-binding domain superfamily) | ||||
| Origin | From_laboratory | MGM | ||||
| Species | Onchocerca volvulus | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00237464 | ||||
| Corresponding_transcript | OVOC655.1 | |||||
| Corresponding_protein | OVP03580 | |||||
| Matching_cDNA | ovolvulus_GG619|c39_g1_i4 | Inferred_automatically | transcript_builder.pl | |||
| Brief_identification | 28S ribosomal protein S15, mitochondrial homolog | Person_evidence | WBPerson2973 | |||
| RNASeq_FPKM | WBls:0000104 (15) | |||||
| WBls:0000107 | 10.3478 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
| WBls:0000108 | 31.7609 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | |||
| 52.3872 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
| 9.99011 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | ||||
| WBls:0000664 | 42.3933 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | |||
| 43.318 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | ||||
| Method | curated |
