WormBase Tree Display for CDS: OVOC659
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| OVOC659 | Evidence | Curator_confirmed | WBPerson2062 | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | OVOC_OM1b_7 | |||
| Structure | Source_exons (105) | |||||
| DB_info | DB_remark | contains similarity to Pfam domains PF00179 (Ubiquitin-conjugating enzyme), PF00653 (Inhibitor of Apoptosis domain); contains similarity to Interpro domains IPR001370 (BIR repeat), IPR000608 (Ubiquitin-conjugating enzyme E2), IPR016135 (Ubiquitin-conjugating enzyme/RWD-like) | ||||
| Origin | From_laboratory | MBM | ||||
| Species | Onchocerca volvulus | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00237468 | ||||
| Corresponding_transcript | OVOC659.1 | |||||
| Corresponding_protein | OVP13469 | |||||
| RNASeq_FPKM | WBls:0000104 (15) | |||||
| WBls:0000107 | 5.66901 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
| WBls:0000108 | 34.9388 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | |||
| 4.56033 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | ||||
| 48.0888 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
| WBls:0000664 | 25.0666 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | |||
| 28.6861 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | ||||
| Remark | [140603 es9] Splice sites of OVOC659 gene model corrected using RNA-Seq, protein evidence and SL1 data. | Curator_confirmed | WBPerson2062 | |||
| Method | curated |
