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WormBase Tree Display for CDS: OVOC693

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Name Class

OVOC693SMapS_parentSequenceOVOC_OM1b_7
StructureSource_exons1102
499618
767838
9271112
11811333
DB_infoDB_remarkcontains similarity to Pfam domain PF00160 (Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD); contains similarity to Interpro domains IPR029000 (Cyclophilin-like domain superfamily), IPR024936 (Cyclophilin-type peptidyl-prolyl cis-trans isomerase), IPR002130 (Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain)
OriginFrom_laboratoryMGM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00237502
Corresponding_transcriptOVOC693.1
Corresponding_proteinOVP12536
Matching_cDNAAA625016Inferred_automaticallytranscript_builder.pl
AA668108Inferred_automaticallytranscript_builder.pl
AA901450Inferred_automaticallytranscript_builder.pl
Brief_identificationPeptidyl-prolyl cis-trans isomerase B homologPerson_evidenceWBPerson2973
RNASeq_FPKMWBls:0000104 (15)
WBls:0000107268.688From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:0000108142.097From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
181.805From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
191.313From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:0000664327.532From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
401.131From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Methodcurated