WormBase Tree Display for CDS: OVOC693
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OVOC693 | SMap | S_parent | Sequence | OVOC_OM1b_7 | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 102 | |||
499 | 618 | |||||
767 | 838 | |||||
927 | 1112 | |||||
1181 | 1333 | |||||
DB_info | DB_remark | contains similarity to Pfam domain PF00160 (Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD); contains similarity to Interpro domains IPR029000 (Cyclophilin-like domain superfamily), IPR024936 (Cyclophilin-type peptidyl-prolyl cis-trans isomerase), IPR002130 (Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain) | ||||
Origin | From_laboratory | MGM | ||||
Species | Onchocerca volvulus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00237502 | ||||
Corresponding_transcript | OVOC693.1 | |||||
Corresponding_protein | OVP12536 | |||||
Matching_cDNA | AA625016 | Inferred_automatically | transcript_builder.pl | |||
AA668108 | Inferred_automatically | transcript_builder.pl | ||||
AA901450 | Inferred_automatically | transcript_builder.pl | ||||
Brief_identification | Peptidyl-prolyl cis-trans isomerase B homolog | Person_evidence | WBPerson2973 | |||
RNASeq_FPKM | WBls:0000104 (15) | |||||
WBls:0000107 | 268.688 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
WBls:0000108 | 142.097 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | |||
181.805 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | ||||
191.313 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
WBls:0000664 | 327.532 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | |||
401.131 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | ||||
Method | curated |