WormBase Tree Display for CDS: OVOC8095
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| OVOC8095 | SMap | S_parent | Sequence | OVOC_OM3_71 | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (17) | |||||
| DB_info | DB_remark | OVO-RIB-2 protein; contains similarity to Pfam domains PF03016 (Exostosin family), PF09258 (Glycosyl transferase family 64 domain); contains similarity to Interpro domains IPR004263 (Exostosin-like), IPR040911 (Exostosin, GT47 domain), IPR015338 (Glycosyl transferase 64 domain), IPR027673 (), IPR029044 (Nucleotide-diphospho-sugar transferases) | ||||
| Origin | From_laboratory | MGM | ||||
| Species | Onchocerca volvulus | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00244904 | ||||
| Corresponding_transcript | OVOC8095.1 | |||||
| Corresponding_protein | OVP04284 | |||||
| Matching_cDNA | ovolvulus_GG317|c99_g1_i10 | Inferred_automatically | transcript_builder.pl | |||
| Brief_identification | Exostosin-2 homolog | Person_evidence | WBPerson2973 | |||
| RNASeq_FPKM | WBls:0000104 (15) | |||||
| WBls:0000107 | 10.3148 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
| WBls:0000108 | 14.814 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | |||
| 33.7701 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
| 37.2934 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | ||||
| WBls:0000664 | 15.1975 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | |||
| 20.7604 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | ||||
| Method | curated |
