WormBase Tree Display for CDS: OVOC8096b
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OVOC8096b | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | OVOC_OM3_71 | |||
Structure | Source_exons (12) | |||||
DB_info | DB_remark | OVO-GRK-2 protein; contains similarity to Pfam domain PF00069 (Protein kinase domain); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR000239 (GPCR kinase), IPR001849 (Pleckstrin homology domain), IPR000719 (Protein kinase domain), IPR011993 (PH-like domain superfamily), IPR000961 (AGC-kinase, C-terminal) | ||||
Origin | From_laboratory | HX | ||||
Species | Onchocerca volvulus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Partially_confirmed | |||||
Isoform | Curator_confirmed | WBPerson4055 | ||||
Feature_evidence | WBsf938444 | |||||
Visible | Gene | WBGene00244905 | ||||
Corresponding_transcript | OVOC8096b.1 | |||||
Corresponding_protein | OVP14670 | |||||
Brief_identification | G protein-coupled receptor kinase 2 homolog | Person_evidence | WBPerson2973 | |||
RNASeq_FPKM | WBls:0000104 (13) | |||||
WBls:0000107 | 1.6e-05 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
WBls:0000108 | 0.005266 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | |||
3.08723 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
4.2e-05 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | ||||
WBls:0000664 | 1.42888 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | |||
4.1e-05 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | ||||
Remark | [150212 mh6] Created this isoform based on the RNASeq splice data and the SL1 site. | Curator_confirmed | WBPerson4055 | |||
Feature_evidence | WBsf938444 | |||||
From_analysis | RNASeq | |||||
Method | curated |