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WormBase Tree Display for CDS: OVOC8096b

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Name Class

OVOC8096bEvidenceCurator_confirmedWBPerson4055
SMapS_parentSequenceOVOC_OM3_71
StructureSource_exons (12)
DB_infoDB_remarkOVO-GRK-2 protein; contains similarity to Pfam domain PF00069 (Protein kinase domain); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR000239 (GPCR kinase), IPR001849 (Pleckstrin homology domain), IPR000719 (Protein kinase domain), IPR011993 (PH-like domain superfamily), IPR000961 (AGC-kinase, C-terminal)
OriginFrom_laboratoryHX
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusPartially_confirmed
IsoformCurator_confirmedWBPerson4055
Feature_evidenceWBsf938444
VisibleGeneWBGene00244905
Corresponding_transcriptOVOC8096b.1
Corresponding_proteinOVP14670
Brief_identificationG protein-coupled receptor kinase 2 homologPerson_evidenceWBPerson2973
RNASeq_FPKMWBls:0000104 (13)
WBls:00001071.6e-05From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001080.005266From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
3.08723From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
4.2e-05From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:00006641.42888From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
4.1e-05From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
Remark[150212 mh6] Created this isoform based on the RNASeq splice data and the SL1 site.Curator_confirmedWBPerson4055
Feature_evidenceWBsf938444
From_analysisRNASeq
Methodcurated