WormBase Tree Display for CDS: OVOC8116
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OVOC8116 | Evidence | Curator_confirmed | WBPerson2062 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | OVOC_OM3_71 | |||
Structure | Source_exons | 1 | 46 | |||
332 | 431 | |||||
714 | 811 | |||||
1309 | 1487 | |||||
1833 | 1913 | |||||
DB_info | DB_remark | OVO-UBC-7 protein; contains similarity to Pfam domain PF00179 (Ubiquitin-conjugating enzyme); contains similarity to Interpro domains IPR000608 (Ubiquitin-conjugating enzyme E2), IPR016135 (Ubiquitin-conjugating enzyme/RWD-like) | ||||
Origin | From_laboratory | MGM | ||||
Species | Onchocerca volvulus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00244925 | ||||
Corresponding_transcript | OVOC8116.1 | |||||
Corresponding_protein | OVP07928 | |||||
Matching_cDNA | AA618968 | Inferred_automatically | transcript_builder.pl | |||
AI095969 | Inferred_automatically | transcript_builder.pl | ||||
AW355188 | Inferred_automatically | transcript_builder.pl | ||||
ovolvulus_GG317|c102_g1_i2 | Inferred_automatically | transcript_builder.pl | ||||
Brief_identification | Putative ubiquitin-conjugating enzyme E2 7 | Person_evidence | WBPerson2973 | |||
RNASeq_FPKM | WBls:0000104 (15) | |||||
WBls:0000107 | 61.9867 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
WBls:0000108 | 104.219 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | |||
73.4616 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | ||||
98.1191 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | ||||
WBls:0000664 | 164.999 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | |||
312.31 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | ||||
Method | curated |