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WormBase Tree Display for CDS: OVOC8148

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Name Class

OVOC8148EvidenceCurator_confirmedWBPerson2062
SMapS_parentSequenceOVOC_OM3_73
StructureSource_exons1139
338520
8771022
13691491
16741946
20812335
28592990
DB_infoDB_remarkcontains similarity to Pfam domain PF00400 (WD domain, G-beta repeat); contains similarity to Interpro domains IPR001680 (WD40 repeat), IPR036322 (WD40-repeat-containing domain superfamily), IPR015943 (WD40/YVTN repeat-like-containing domain superfamily)
OriginFrom_laboratoryMBM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00244957
Corresponding_transcriptOVOC8148.1
Corresponding_proteinOVP13952
Brief_identificationAngio-associated migratory cell protein homologPerson_evidenceWBPerson2973
RNASeq_FPKMWBls:0000104 (13)
WBls:00001071.66888From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001080.757499From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
10.9784From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
22.3035From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:000066412.5177From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
32.5983From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Remark[140508 es9] Gene model OVOC8148 has been split into this and OVOC13492 based on RNA-Seq and protein evidence data.Curator_confirmedWBPerson2062
Methodcurated