WormBase Tree Display for CDS: OVOC8148
expand all nodes | collapse all nodes | view schema
OVOC8148 | Evidence | Curator_confirmed | WBPerson2062 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | OVOC_OM3_73 | |||
Structure | Source_exons | 1 | 139 | |||
338 | 520 | |||||
877 | 1022 | |||||
1369 | 1491 | |||||
1674 | 1946 | |||||
2081 | 2335 | |||||
2859 | 2990 | |||||
DB_info | DB_remark | contains similarity to Pfam domain PF00400 (WD domain, G-beta repeat); contains similarity to Interpro domains IPR001680 (WD40 repeat), IPR036322 (WD40-repeat-containing domain superfamily), IPR015943 (WD40/YVTN repeat-like-containing domain superfamily) | ||||
Origin | From_laboratory | MBM | ||||
Species | Onchocerca volvulus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00244957 | ||||
Corresponding_transcript | OVOC8148.1 | |||||
Corresponding_protein | OVP13952 | |||||
Brief_identification | Angio-associated migratory cell protein homolog | Person_evidence | WBPerson2973 | |||
RNASeq_FPKM | WBls:0000104 (13) | |||||
WBls:0000107 | 1.66888 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
WBls:0000108 | 0.757499 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | |||
10.9784 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | ||||
22.3035 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
WBls:0000664 | 12.5177 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | |||
32.5983 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | ||||
Remark | [140508 es9] Gene model OVOC8148 has been split into this and OVOC13492 based on RNA-Seq and protein evidence data. | Curator_confirmed | WBPerson2062 | |||
Method | curated |