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WormBase Tree Display for CDS: OVOC8222

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Name Class

OVOC8222SMapS_parentSequenceOVOC_OM3_73
StructureSource_exons1128
256479
9251124
DB_infoDB_remarkcontains similarity to Pfam domain PF00010 (Helix-loop-helix DNA-binding domain); contains similarity to Interpro domains IPR036638 (Helix-loop-helix DNA-binding domain superfamily), IPR011598 (Myc-type, basic helix-loop-helix (bHLH) domain)
OriginFrom_laboratoryMGM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00245031
Corresponding_transcriptOVOC8222.1
OVOC8222.2
Corresponding_proteinOVP05666
Matching_cDNAovolvulus_GG367|c225_g1_i3Inferred_automaticallytranscript_builder.pl
ovolvulus_GG367|c225_g1_i4Inferred_automaticallytranscript_builder.pl
ovolvulus_GG367|c225_g1_i5Inferred_automaticallytranscript_builder.pl
Brief_identificationFer3-like protein homologPerson_evidenceWBPerson2973
RNASeq_FPKMWBls:0000104 (15)
WBls:00001072.92603From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001082.20598From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
3.5406From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
5.82025From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:00006643.68072From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
3.94388From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Methodcurated