WormBase Tree Display for CDS: OVOC9277
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| OVOC9277 | SMap | S_parent | Sequence | OVOC_OM3_99 | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (12) | |||||
| DB_info | DB_remark | contains similarity to Pfam domains PF00183 (Hsp90 protein), PF13589 (Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase); contains similarity to Interpro domains IPR001404 (Heat shock protein Hsp90 family), IPR020568 (Ribosomal protein uS5 domain 2-type superfamily), IPR020575 (Heat shock protein Hsp90, N-terminal), IPR036890 (Histidine kinase/HSP90-like ATPase superfamily), IPR003594 (Histidine kinase/HSP90-like ATPase), IPR037196 (HSP90, C-terminal domain) | ||||
| Origin | From_laboratory | MGM | ||||
| Species | Onchocerca volvulus | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00246086 | ||||
| Corresponding_transcript | OVOC9277.1 | |||||
| OVOC9277.2 | ||||||
| Corresponding_protein | OVP03976 | |||||
| Matching_cDNA | ovolvulus_GG387|c69_g2_i3 | Inferred_automatically | transcript_builder.pl | |||
| ovolvulus_GG387|c69_g2_i5 | Inferred_automatically | transcript_builder.pl | ||||
| Brief_identification | Heat shock protein 75 kDa, mitochondrial homolog | Person_evidence | WBPerson2973 | |||
| RNASeq_FPKM | WBls:0000104 (15) | |||||
| WBls:0000107 | 2.32911 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
| WBls:0000108 | 1.64541 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | |||
| 6.22893 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
| 6.39866 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | ||||
| WBls:0000664 | 17.7387 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | |||
| 7.58361 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | ||||
| Method | curated |
