WormBase Tree Display for CDS: OVOC9337
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| OVOC9337 | Evidence | Curator_confirmed | WBPerson2062 | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | OVOC_OM3_101 | |||
| Structure | Source_exons | 1 | 181 | |||
| 433 | 558 | |||||
| 877 | 983 | |||||
| 1059 | 1220 | |||||
| 1352 | 1456 | |||||
| 1941 | 2094 | |||||
| 2462 | 2583 | |||||
| DB_info | DB_remark | OVO-UFBP-1 protein; contains similarity to Pfam domain PF09756 (DDRGK domain); contains similarity to Interpro domains IPR019153 (DDRGK domain containing protein), IPR036390 (Winged helix DNA-binding domain superfamily), IPR036388 (Winged helix-like DNA-binding domain superfamily) | ||||
| Origin | From_laboratory | MGM | ||||
| Species | Onchocerca volvulus | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00246146 | ||||
| Corresponding_transcript | OVOC9337.1 | |||||
| Corresponding_protein | OVP11870 | |||||
| Matching_cDNA | AW257702 | Inferred_automatically | transcript_builder.pl | |||
| ovolvulus_GG412|c115_g1_i3 | Inferred_automatically | transcript_builder.pl | ||||
| RNASeq_FPKM | WBls:0000104 (15) | |||||
| WBls:0000107 | 16.7037 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
| WBls:0000108 | 12.2104 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | |||
| 37.8968 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | ||||
| 45.8173 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
| WBls:0000664 | 50.8553 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | |||
| 58.2232 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | ||||
| Method | curated |
