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WormBase Tree Display for CDS: PPA00010

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Name Class

PPA00010SMapS_parentSequencePPA_ChrI
StructureSource_exons (15)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S57-18.21
DB_remarkcontains similarity to Pfam domain PF00505 (HMG (high mobility group) box); contains similarity to Interpro domains IPR036910 (High mobility group box domain superfamily), IPR009071 (High mobility group box domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00089564
Corresponding_transcriptPPA00010.1
Corresponding_proteinPP51399
Corresponding_oligo_setGPL14372_Probes_54801
GPL14372_Probes_54802
GPL14372_Probes_54803
Microarray_resultsGPL14372_Probes_54801
GPL14372_Probes_54802
GPL14372_Probes_54803
RNASeq_FPKMWBls:000003211.1108From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010110.4978From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S57-18.21Curator_confirmedWBPerson4055
Methodcurated