WormBase Tree Display for CDS: PPA00024

PPA00024 SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons (29)
  DB_info: Database: pristionchus.org cds gene-UMM-S57-18.7
    DB_remark: PPA-LIN-2 protein; contains similarity to Pfam domains PF00018 (SH3 domain), PF00069 (Protein kinase domain), PF00595 (PDZ domain), PF00625 (Guanylate kinase), PF02828 (L27 domain); contains similarity to Interpro domains IPR008145 (Guanylate kinase/L-type calcium channel beta subunit), IPR011009 (Protein kinase-like domain superfamily), IPR036028 (SH3-like domain superfamily), IPR036892 (L27 domain superfamily), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR001478 (PDZ domain), IPR036034 (PDZ superfamily), IPR014775 (L27 domain, C-terminal), IPR001452 (SH3 domain), IPR000719 (Protein kinase domain), IPR004172 (L27 domain)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Predicted
  Visible: Gene: WBGene00089578
    Corresponding_transcript: PPA00024.1
    Corresponding_protein: PP65211
    Corresponding_oligo_set: GPL14372_Probes_54846
      GPL14372_Probes_54847
      GPL14372_Probes_54848
      GPL14372_Probes_9270
      GPL14372_Probes_9271
      GPL14372_Probes_9272
      GPL14372_Probes_9273
      GPL14372_Probes_9274
    Microarray_results: GPL14372_Probes_9270
      GPL14372_Probes_9271
      GPL14372_Probes_9272
      GPL14372_Probes_9273
      GPL14372_Probes_9274
      GPL14372_Probes_54846
      GPL14372_Probes_54847
      GPL14372_Probes_54848
    RNASeq_FPKM: WBls:0000032 3.48228 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 1.3708 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Remark: [171116 mh6] renamed from gene-UMM-S57-18.7 Curator_confirmed: WBPerson4055
  Method: curated