WormBase Tree Display for CDS: PPA00048

PPA00048 Evidence: Curator_confirmed: WBPerson4055
  SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons (29)
  DB_info: Database: pristionchus.org cds gene-UMA-S57-20.24
    DB_remark: contains similarity to Pfam domain PF00400 (WD domain, G-beta repeat); contains similarity to Interpro domains IPR001680 (WD40 repeat), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR036322 (WD40-repeat-containing domain superfamily), IPR042755 (E3 ubiquitin-protein ligase COP1), IPR015943 (WD40/YVTN repeat-like-containing domain superfamily)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Predicted
  Visible: Gene: WBGene00089602
    Corresponding_transcript: PPA00048.1
    Corresponding_protein: PP75016
    Corresponding_oligo_set: GPL14372_Probes_54920
      GPL14372_Probes_54921
      GPL14372_Probes_54923
      GPL14372_Probes_54925
      GPL14372_Probes_54926
    Microarray_results: GPL14372_Probes_54920
      GPL14372_Probes_54921
      GPL14372_Probes_54923
      GPL14372_Probes_54925
      GPL14372_Probes_54926
    RNASeq_FPKM: WBls:0000032 7.66725 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 1.50912 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Last_reviewed: 04 Jul 2019 12:01:16 WBPerson4055
    Remark: [171116 mh6] renamed from gene-UMA-S57-20.24 Curator_confirmed: WBPerson4055
      [190221 mh6] updated to the latest set provided my MPG Curator_confirmed: WBPerson18244
      [190704 mh6] This CDS has been updated based on the RNAseq data. Curator_confirmed: WBPerson4055
        From_analysis: RNASeq
  Method: curated