WormBase Tree Display for CDS: PPA00081
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| PPA00081 | SMap | S_parent | Sequence | PPA_ChrI | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (26) | |||||
| DB_info | Database | pristionchus.org | cds | gene-UMM-S57-22.2 | ||
| DB_remark | PPA-AGS-3 protein; contains similarity to Pfam domain PF02188 (GoLoco motif); contains similarity to Interpro domains IPR019734 (Tetratricopeptide repeat), IPR011990 (Tetratricopeptide-like helical domain superfamily), IPR003109 (GoLoco motif) | |||||
| Origin | From_laboratory | RS | ||||
| Species | Pristionchus pacificus | |||||
| Properties | Coding | CDS | ||||
| CDS_predicted_by | pristionchus.org | |||||
| Prediction_status | Predicted | |||||
| Visible | Gene | WBGene00089635 | ||||
| Corresponding_transcript | PPA00081.1 | |||||
| Corresponding_protein | PP70101 | |||||
| Corresponding_oligo_set (12) | ||||||
| Microarray_results (12) | ||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
| Remark | [171116 mh6] renamed from gene-UMM-S57-22.2 | Curator_confirmed | WBPerson4055 | |||
| Method | curated |
