WormBase Tree Display for CDS: PPA00117

PPA00117 SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons (11)
  DB_info: Database: pristionchus.org cds gene-UMA-S57-24.20
      TREEFAM TREEFAM_ID TF320527
    DB_remark: contains similarity to Pfam domain PF04300 (F-box associated region); contains similarity to Interpro domains IPR007397 (F-box associated (FBA) domain), IPR039752 (F-box only protein), IPR008979 (Galactose-binding-like domain superfamily), IPR036047 (F-box-like domain superfamily)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Partially_confirmed
  Visible: Gene: WBGene00089671
    Corresponding_transcript: PPA00117.1
    Corresponding_protein: PP63954
    Corresponding_oligo_set: GPL14372_Probes_55077
      GPL14372_Probes_55078
      GPL14372_Probes_55079
      GPL14372_Probes_55080
    Microarray_results: GPL14372_Probes_55077
      GPL14372_Probes_55078
      GPL14372_Probes_55079
      GPL14372_Probes_55080
    RNASeq_FPKM: WBls:0000032 4.3154 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 5.09732 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Remark: [171116 mh6] renamed from gene-UMA-S57-24.20 Curator_confirmed: WBPerson4055
  Method: curated