WormBase Tree Display for CDS: PPA00131
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PPA00131 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 79 | |||
206 | 249 | |||||
297 | 390 | |||||
594 | 712 | |||||
798 | 891 | |||||
1010 | 1130 | |||||
1197 | 1258 | |||||
1725 | 1900 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S57-25.2 | ||
TREEFAM | TREEFAM_ID | TF313173 | ||||
DB_remark | contains similarity to Pfam domain PF00230 (Major intrinsic protein); contains similarity to Interpro domains IPR023271 (Aquaporin-like), IPR000425 (Major intrinsic protein) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00089685 | ||||
Corresponding_transcript | PPA00131.1 | |||||
Corresponding_protein | PP60715 | |||||
Corresponding_oligo_set | GPL14372_Probes_9416 | |||||
GPL14372_Probes_9417 | ||||||
GPL14372_Probes_9418 | ||||||
GPL14372_Probes_9419 | ||||||
GPL14372_Probes_9420 | ||||||
Microarray_results | GPL14372_Probes_9416 | |||||
GPL14372_Probes_9417 | ||||||
GPL14372_Probes_9418 | ||||||
GPL14372_Probes_9419 | ||||||
GPL14372_Probes_9420 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S57-25.2 | Curator_confirmed | WBPerson4055 | |||
Method | curated |