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WormBase Tree Display for CDS: PPA00215

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Name Class

PPA00215SMapS_parentSequencePPA_ChrI
StructureSource_exons (15)
DB_infoDatabasepristionchus.orgcdsgene-UMA-S57-30.30
DB_remarkcontains similarity to Pfam domains PF00091 (Tubulin/FtsZ family, GTPase domain), PF03953 (Tubulin C-terminal domain); contains similarity to Interpro domains IPR002452 (Alpha tubulin), IPR000217 (Tubulin), IPR003008 (Tubulin/FtsZ, GTPase domain), IPR023123 (Tubulin, C-terminal), IPR018316 (Tubulin/FtsZ, 2-layer sandwich domain), IPR037103 (Tubulin/FtsZ-like, C-terminal domain), IPR036525 (Tubulin/FtsZ, GTPase domain superfamily), IPR008280 (Tubulin/FtsZ, C-terminal)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusConfirmed
VisibleGeneWBGene00089769
Corresponding_transcriptPPA00215.1
Corresponding_proteinPP67644
Corresponding_oligo_setGPL14372_Probes_9585
Matching_cDNAFE938884Inferred_automaticallytranscript_builder.pl
FE935068Inferred_automaticallytranscript_builder.pl
AW114156Inferred_automaticallytranscript_builder.pl
AI988791Inferred_automaticallytranscript_builder.pl
BQ087995Inferred_automaticallytranscript_builder.pl
AW097772Inferred_automaticallytranscript_builder.pl
AW097265Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_9585
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010125.0046From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMA-S57-30.30Curator_confirmedWBPerson4055
Methodcurated