WormBase Tree Display for CDS: PPA00218
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PPA00218 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 79 | |||
242 | 294 | |||||
741 | 850 | |||||
1361 | 1496 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S57-31.53 | ||
DB_remark | contains similarity to Pfam domain PF14712 (Snapin/Pallidin); contains similarity to Interpro domains IPR028119 (Snapin/Pallidin/Snn1), IPR017246 (Snapin) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00089772 | ||||
Corresponding_transcript | PPA00218.1 | |||||
Corresponding_protein | PP70773 | |||||
RNASeq_FPKM | WBls:0000032 | 36.7717 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 65.2117 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S57-31.53 | Curator_confirmed | WBPerson4055 | |||
Method | curated |